處理多個資料和多檔案時，使用for回圈的速度非常慢，此時需要用多執行緒來加速運行進度，常用的模塊為multiprocess和joblib，下面對兩種包我常用的方法進行說明，
1、模塊安裝
pip install multiprocessing
pip install joblib2、以分塊計算NDVI為例
首先匯入需要的包
import numpy as np
from osgeo import gdal
import time
from multiprocessing import cpu_count
from multiprocessing import Pool
from joblib import Parallel, delayed定義GdalUtil類，以讀取遙感資料
class GdalUtil:
def __init__(self):
pass
@staticmethod
def read_file(raster_file, read_band=None):
"""讀取柵格資料"""
# 注冊柵格驅動
gdal.AllRegister()
gdal.SetConfigOption('gdal_FILENAME_IS_UTF8', 'YES')
# 打開輸入影像
dataset = gdal.Open(raster_file, gdal.GA_ReadOnly)
if dataset == None:
print('打開影像{0} 失敗.\n', raster_file)
# 列
raster_width = dataset.RasterXSize
# 行
raster_height = dataset.RasterYSize
# 讀取資料
if read_band == None:
data_array = dataset.ReadAsArray(0, 0, raster_width, raster_height)
else:
band = dataset.GetRasterBand(read_band)
data_array = band.ReadAsArray(0, 0, raster_width, raster_height)
return data_array
@staticmethod
def read_block_data(dataset, band_num, cols_read, rows_read, start_col=0, start_row=0):
band = dataset.GetRasterBand(band_num)
res_data = band.ReadAsArray(start_col, start_row, cols_read, rows_read)
return res_data
@staticmethod
def get_raster_band(raster_path):
# 注冊柵格驅動
gdal.AllRegister()
gdal.SetConfigOption('gdal_FILENAME_IS_UTF8', 'YES')
# 打開輸入影像
dataset = gdal.Open(raster_path, gdal.GA_ReadOnly)
if dataset == None:
print('打開影像{0} 失敗.\n', raster_path)
raster_band = dataset.RasterCount
return raster_band
@staticmethod
def get_file_size(raster_path):
"""獲取柵格仿射變換引數"""
# 注冊柵格驅動
gdal.AllRegister()
gdal.SetConfigOption('gdal_FILENAME_IS_UTF8', 'YES')
# 打開輸入影像
dataset = gdal.Open(raster_path, gdal.GA_ReadOnly)
if dataset == None:
print('打開影像{0} 失敗.\n', raster_path)
# 列
raster_width = dataset.RasterXSize
# 行
raster_height = dataset.RasterYSize
return raster_width, raster_height
@staticmethod
def get_file_geotransform(raster_path):
"""獲取柵格仿射變換引數"""
# 注冊柵格驅動
gdal.AllRegister()
gdal.SetConfigOption('gdal_FILENAME_IS_UTF8', 'YES')
# 打開輸入影像
dataset = gdal.Open(raster_path, gdal.GA_ReadOnly)
if dataset == None:
print('打開影像{0} 失敗.\n', raster_path)
# 獲取輸入影像仿射變換引數
input_geotransform = dataset.GetGeoTransform()
return input_geotransform
@staticmethod
def get_file_proj(raster_path):
"""獲取柵格影像空間參考"""
# 注冊柵格驅動
gdal.AllRegister()
gdal.SetConfigOption('gdal_FILENAME_IS_UTF8', 'YES')
# 打開輸入影像
dataset = gdal.Open(raster_path, gdal.GA_ReadOnly)
if dataset == None:
print('打開影像{0} 失敗.\n', raster_path)
# 獲取輸入影像空間參考
input_project = dataset.GetProjection()
return input_project
@staticmethod
def write_file(dataset, geotransform, project, output_path, out_format='GTiff', eType=gdal.GDT_Float32):
"""寫入柵格"""
if np.ndim(dataset) == 3:
out_band, out_rows, out_cols = dataset.shape
else:
out_band = 1
out_rows, out_cols = dataset.shape
# 創建指定輸出格式的驅動
out_driver = gdal.GetDriverByName(out_format)
if out_driver == None:
print('格式%s 不支持Creat()方法.\n', out_format)
return
out_dataset = out_driver.Create(output_path, xsize=out_cols,
ysize=out_rows, bands=out_band,
eType=eType)
# 設定輸出影像的仿射引數
out_dataset.SetGeoTransform(geotransform)
# 設定輸出影像的投影引數
out_dataset.SetProjection(project)
# 寫出資料
if out_band == 1:
out_dataset.GetRasterBand(1).WriteArray(dataset)
else:
for i in range(out_band):
out_dataset.GetRasterBand(i + 1).WriteArray(dataset[i])
del out_dataset定義計算NDVI的函式
def cal_ndvi(multi):
'''
計算高分NDVI
:param multi:格式為串列，依次包含[遙感檔案路徑，開始行號，開始列號，待讀的行數，待讀的列數]
:return: NDVI陣列
'''
input_file, start_col, start_row, cols_step, rows_step = multi
dataset = gdal.Open(input_file, gdal.GA_ReadOnly)
nir_data = GdalUtil.read_block_data(dataset, 4, cols_step, rows_step, start_col=start_col, start_row=start_row)
red_data = GdalUtil.read_block_data(dataset, 3, cols_step, rows_step, start_col=start_col, start_row=start_row)
ndvi = (nir_data - red_data) / (nir_data + red_data)
ndvi[(ndvi > 1.5) | (ndvi < -1)] = 0
return ndvi定義主函式
if __name__ == "__main__":
input_file = r'D:\originalData\GF1\namucuo2021.tif'
output_file = r'D:\originalData\GF1\namucuo2021_ndvi.tif'
method = 'joblib'
# method = 'multiprocessing'
# 獲取檔案主要資訊
raster_cols, raster_rows = GdalUtil.get_file_size(input_file)
geotransform = GdalUtil.get_file_geotransform(input_file)
project = GdalUtil.get_file_proj(input_file)
# 定義分塊大小
rows_block_size = 50
cols_block_size = 50
multi = []
for j in range(0, raster_rows, rows_block_size):
for i in range(0, raster_cols, cols_block_size):
if j + rows_block_size < raster_rows:
rows_step = rows_block_size
else:
rows_step = raster_rows - j
# 資料橫向步長
if i + cols_block_size < raster_cols:
cols_step = cols_block_size
else:
cols_step = raster_cols - i
temp_multi = [input_file, i, j, cols_step, rows_step]
multi.append(temp_multi)
t1 = time.time()
if method == 'multiprocessing':
# multiprocessing方法
pool = Pool(processes=cpu_count()-1)
# 注意map函式中傳入的引數應該是可迭代物件，如list;回傳值為list
res = pool.map(cal_ndvi, multi)
pool.close()
pool.join()
else:
# joblib方法
res = Parallel(n_jobs=-1)(delayed(cal_ndvi)(input_list) for input_list in multi)
t2 = time.time()
print("Total time:" + (t2 - t1).__str__())
# 將multiprocessing中的結果提取出來，放回對應的矩陣位置中
out_data = np.zeros([raster_rows, raster_cols], dtype='float')
for result, input_multi in zip(res, multi):
start_col = input_multi[1]
start_row = input_multi[2]
cols_step = input_multi[3]
rows_step = input_multi[4]
out_data[start_row:start_row + rows_step, start_col:start_col + cols_step] = result
GdalUtil.write_file(out_data, geotransform, project, output_file)雙重for回圈時，兩層for回圈都使用multiprocessing時會報錯，這時可以外層for回圈使用joblib方法，內層for回圈改為multiprocessing方法，不會報錯
轉載請註明出處，本文鏈接：https://www.uj5u.com/qita/414018.html
標籤：其他