我有兩個檔案名幾乎相同的檔案:
/home/104800-001-001/H27VNDSX3_104800-001-001_GCCTATCA-CGACCATT_L002_R1.extracted.fastq.gz
/home/104800-001-001/H27VNDSX3_104800-001-001_GCCTATCA-CGACCATT_L002_R3.extracted.fastq.gz
如何在 bash 中僅提取不同的字符?
期望的輸出:
1 3
編輯:
- 總是一樣的長度
- 僅考慮 _R[0-9] 的差異
uj5u.com熱心網友回復:
只比較一個有趣的子集
(按編輯回答問題)
#!/usr/bin/env bash
s1='/home/104800-001-001/H27VNDSX3_104800-001-001_GCCTATCA-CGACCATT_L002_R1.extracted.fastq.gz'
s2='/home/104800-001-001/H27VNDSX3_104800-001-001_GCCTATCA-CGACCATT_L002_R3.extracted.fastq.gz'
revision_re='_R([[:digit:]] )[._]'
rev1=; rev2=;
[[ $s1 =~ $revision_re ]] && rev1=${BASH_REMATCH[1]}
[[ $s2 =~ $revision_re ]] && rev2=${BASH_REMATCH[1]}
if [[ $rev1 && $rev2 ]] && [[ $rev1 != "$rev2" ]]; then
printf '%s %s\n' "$rev1" "$rev2"
fi
比較整個字串
(回答最初提出的問題)
#!/usr/bin/env bash
s1='/home/104800-001-001/H27VNDSX3_104800-001-001_GCCTATCA-CGACCATT_L002_R1.extracted.fastq.gz'
s2='/home/104800-001-001/H27VNDSX3_104800-001-001_GCCTATCA-CGACCATT_L002_R3.extracted.fastq.gz'
max_len=$(( ${#s1} > ${#s2} ? ${#s1} : ${#s2} ))
for (( idx=0; idx<max_len; idx )); do
if [[ ${s1:idx:1} != "${s2:idx:1}" ]]; then
printf '%s ' "${s1:idx:1}" "${s2:idx:1}"
fi
done
printf '\n'
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